Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909533.1_cds_XP_016459713.1_53213
CDS Infomation

[gene=LOC107783257] [db_xref=GeneID:107783257] [protein=geranylgeranyl diphosphate reductase, chloroplastic] [protein_id=XP_016459713.1] [location=31822..33216] [gbkey=CDS]
Sequence

ATGGCTTCCATTGCTCTCAAAACTTTCACCGGCCTCCGTCAATCCTCGCCGGAAAACAAT
TCCATTACTCTTTCTAAATCCCTCCCCTTCACCCAAACCCACCGTAGGCTCCGAATCAAT
GCTTCCAAATCCAGCCCAAGAGTCAACGGCCGCAATCTTCGTGTTGCGGTGGTGGGCGGT
GGTCCTGCTGGTGGCGCCGCCGCTGAAACACTCGCCAAGGGAGGAATTGAAACCTTCTTA
ATCGAACGCAAAATGGACAACTGCAAACCCTGCGGTGGGGCCATCCCACTTTGCATGGTG
GGAGAATTTGACCTCCCTTTGGATATCATTGACCGGAAAGTTACAAAGATGAAGATGATT
TCCCCATCCAACGTTGCTGTTGATATTGGTCAGACTTTAAAGCCTCACGAGTACATCGGT
ATGGTGCGCCGCGAAGTACTCGATGCTTACCTCCGTGACCGCGCTGCTGAAGCCGGAGCC
TCTGTTCTCAACGGCTTGTTCCTCAAAATGGACATGCCCAAAGCTCCCAACGCACCTTAC
GTCCTTCACTACACAGCTTACGACTCCAAAACTAATGGCGCGGGGGAGAAGCGTACCCTG
GAAGTTGACGCCGTTATCGGCGCTGACGGTGCAAATTCCCGTGTCGCAAAATCCATAAAC
GCCGGTGACTACGAGTACGCTATTGCATTCCAAGAAAGGATTAAAATTTCCGATGATAAA
ATGAAGTATTACGAGAATTTAGCTGAAATGTACGTGGGTGATGACGTGTCCCCTGATTTT
TACGGGTGGGTTTTCCCCAAATGTGACCACGTTGCCGTTGGCACTGGCACAGTCACCCAC
AAAGCTGACATCAAAAAATTCCAGCTAGCTACAAGATTGAGAGCTGATTCCAAAATCACC
GGCGGAAAAATTATCCGGGTCGAGGCCCACCCGATTCCAGAACACCCAAGACCCAGAAGA
TTACAAGACAGAGTTGCATTGGTTGGTGATGCGGCAGGGTACGTGACCAAATGTTCGGGC
GAAGGGATTTACTTCGCGGCAAAGAGTGGACGTATGTGTGCTGAAGCAATTGTTGAAGGG
TCAGAAATGGGAAAAAGAATGGTGGACGAGAGTGATTTGAGGAAGTATTTGGAGAAATGG
GACAAGACTTATTGGCCAACGTACAAGGTGCTTGATATATTGCAGAAGGTATTTTACAGG
TCGAATCCGGCGAGGGAAGCATTTGTTGAAATGTGCGCAGATGAGTATGTGCAGAAGATG
ACATTTGACAGCTATTTGTACAAGAAAGTAGCACCAGGAAACCCAATTGAAGACTTGAAG
CTTGCTGTGAATACCATTGGAAGTTTGGTGAGAGCTAATGCACTAAGAAGGGAAATGGAC
AAGCTCAGTGTATAA

Peptide Sequence

PEP ID

XP_016459713.1
PEP Infomation

PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic [Nicotiana tabacum]
Sequence

MASIALKTFTGLRQSSPENNSITLSKSLPFTQTHRRLRINASKSSPRVNGRNLRVAVVGG
GPAGGAAAETLAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMI
SPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNAPY
VLHYTAYDSKTNGAGEKRTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIKISDDK
MKYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKADIKKFQLATRLRADSKIT
GGKIIRVEAHPIPEHPRPRRLQDRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEG
SEMGKRMVDESDLRKYLEKWDKTYWPTYKVLDILQKVFYRSNPAREAFVEMCADEYVQKM
TFDSYLYKKVAPGNPIEDLKLAVNTIGSLVRANALRREMDKLSV

Transcript Sequence

Gene sequence data has not been registered.